Complications in Climate Data Classification: The Political and Cultural Production of Variable Names

Model intercomparison projects are a unique and highly specialized form of data—intensive collaboration in the earth sciences. Typically, a set of pre‐determined boundary conditions (scenarios) are agreed upon by a community of model developers that then test and simulate each of those scenarios with individual ‘runs’ of a climate model. Because both the human expertise, and the computational power needed to produce an intercomparison project are exceptionally expensive, the data they produce are often archived for the broader climate science community to use in future research. Outside of high energy physics and astronomy sky surveys, climate modeling intercomparisons are one of the largest and most rapid methods of producing data in the natural sciences (Overpeck et al., 2010).But, like any collaborative eScience project, the discovery and broad accessibility of this data is dependent on classifications and categorizations in the form of structured metadata—namely the Climate and Forecast (CF) metadata standard, which provides a controlled vocabulary to normalize the naming of a dataset’s variables. Intriguingly, the CF standard’s original publication notes, “…conventions have been developed only for things we know we need. Instead of trying to foresee the future, we have added features as required and will continue to do this” (Gregory, 2003). Yet, qualitatively we’ve observed that  this is not the case; although the time period of intercomparison projects remains stable (2-3 years), the scale and complexity of models and their output continue to grow—and thus, data creation and variable names consistently outpace the ratification of CF.

Robust multi-year climate impacts of volcanic eruptions in decadal prediction systems

Major tropical volcanic eruptions have a large impact on climate, but there have only been three major eruptions during the recent relatively well-observed period. Models are therefore an important tool to understand and predict the impacts of an eruption. This study uses five state-of-the-art decadal prediction systems that have been initialized with the observed state before volcanic aerosols are introduced. The impact of the volcanic aerosols is found by subtracting the results of a reference experiment where the volcanic aerosols are omitted. We look for the robust impact across models and volcanoes by combining all the experiments, which helps reveal a signal even if it is weak in the models. The models used in this study simulate realistic levels of warming in the stratosphere, but zonal winds are weaker than the observations. As a consequence, models can produce a pattern similar to the North Atlantic Oscillation in the first winter following the eruption, but the response and impact on surface temperatures is weaker than in observations. Reproducing the pattern, but not the amplitude, may be related to a known model error. There are also impacts in the Pacific and Atlantic Oceans. This work contributes towards improving the interpretation of decadal predictions in the case of a future large tropical volcanic eruption

Assessing Driver Acceptability of the PROSPECT Systems

Final Event of the European Projects on the Traffic Safety of Vulnerable Road Users, TARRAGONA, ESPAGNE, 12-/10/2018 - 12/10/2018Acceptance testing provides knowledge on users' perception of the systems developed within the PROSPECT project, and an indication of their likelihood to purchase such a system. Results show a high likelihood of acceptance of PROSPECT systems. Participants were most positive towards the warning function, but also indicated a high likelihood of using the braking and steering functions

Vaccination With Moderate Coverage Eradicates Oncogenic Human Papillomaviruses If a Gender-Neutral Strategy Is Applied

jiaa099Human papillomavirus (HPV) vaccination of girls with very high (\gt;90\ coverage has the potential to eradicate oncogenic HPVs, but such high coverage is hard to achieve. However, the herd effect (HE) depends both on the HPV type and the vaccination strategy.We randomized 33 Finnish communities into gender-neutral HPV16/18 vaccination, girls-only HPV16/18 vaccination, and hepatitis B virus vaccination arms. In 2007–2010, 11 662 of 20 513 of 40 852 of 39 420 resident boys/girls from 1992 to 1995 birth cohorts consented. In 2010–2014, cervicovaginal samples from vaccinated and unvaccinated girls at age 18.5 years were typed for HPV6/11/16/18/31/33/35/39/45/51/52/56/58/59/66/68. Vaccine efficacy for vaccinated girls, HE for unvaccinated girls, and the protective effectiveness (PE) for all girls were estimated. We extended the community-randomized trial results about vaccination strategy with mathematical modeling to assess HPV eradication.The HE and PE estimates in the 1995 birth cohort for HPV18/31/33 were significant in the gender-neutral arm and 150\% and 40\% stronger than in the girls-only arm. Concordantly, HPV18/31/33 eradication was already predicted in adolescents/young adults in 20 years with 75\% coverage of gender-neutral vaccination. With the 75\% coverage, eventual HPV16 eradication was also predicted, but only with the gender-neutral strategy.Gender-neutral vaccination is superior for eradication of oncogenic HPVs.Peer reviewe

Attraction and repulsion of mobile wild organisms to finfish and shellfish aquaculture: a review

Knowledge of aquaculture–environment interactions is essential for the development of a sustainable aquaculture industry and efficient marine spatial planning. The effects of fish and shellfish farming on sessile wild populations, particularly infauna, have been studied intensively. Mobile fauna, including crustaceans, fish, birds and marine mammals, also interact with aquaculture operations, but the interactions are more complex and these animals may be attracted to (attraction) or show an aversion to (repulsion) farm operations with various degrees of effects. This review outlines the main mechanisms and effects of attraction and repulsion of wild animals to/from marine finfish cage and bivalve aquaculture, with a focus on effects on fisheries-related species. Effects considered in this review include those related to the provision of physical structure (farm infrastructure acting as fish aggregating devices (FADs) or artificial reefs (ARs), the provision of food (e.g. farmed animals, waste feed and faeces, fouling organisms associated with farm structures) and some farm activities (e.g. boating, cleaning). The reviews show that the distribution of mobile organisms associated with farming structures varies over various spatial (vertical and horizontal) and temporal scales (season, feeding time, day/night period). Attraction/repulsion mechanisms have a variety of direct and indirect effects on wild organisms at the level of individuals and populations and may have implication for the management of fisheries species and the ecosystem in the context of marine spatial planning. This review revealed considerable uncertainties regarding the long-term and ecosystem-wide consequences of these interactions. The use of modelling may help better understand consequences, but long-term studies are necessary to better elucidate effects

A Simplified Method for Patterning Graphene on Dielectric Layers

The large-scale formation of patterned, quasi-freestanding graphene structures supported on a dielectric has so far been limited by the need to transfer the graphene onto a suitable substrate and contamination from the associated processing steps. We report μm scale, few-layer graphene structures formed at moderate temperatures (600–700 °C) and supported directly on an interfacial dielectric formed by oxidizing Si layers at the graphene/substrate interface. We show that the thickness of this underlying dielectric support can be tailored further by an additional Si intercalation of the graphene prior to oxidation. This produces quasi-freestanding, patterned graphene on dielectric SiO2 with a tunable thickness on demand, thus facilitating a new pathway to integrated graphene microelectronics

Science-Driven Network Requirements for ESnet

The Energy Sciences Network (ESnet) is the primary providerof network connectivity for the US Department of Energy Office ofScience, the single largest supporter of basic research in the physicalsciences in the United States. In support of the Office of Scienceprograms, ESnet regularly updates and refreshes its understanding of thenetworking requirements of the instruments, facilities and scientiststhat it serves. This focus has helped ESnet to be a highly successfulenabler of scientific discovery for over 20 years. In August, 2002 theDOE Office of Science organized a workshop to characterize the networkingrequirements for Office of Science programs. Networking and middlewarerequirements were solicited from a representative group of scienceprograms. The workshop was summarized in two documents the workshop finalreport and a set of appendixes. This document updates the networkingrequirements for ESnet as put forward by the science programs listed inthe 2002 workshop report. In addition, three new programs have beenadded. Theinformation was gathered through interviews with knowledgeablescientists in each particular program or field

Effect of high intensity interval training on cardiac function in children with obesity: a randomised controlled trial

High intensity interval training (HIIT) confers superior cardiovascular health benefits to moderate intensity continuous training (MICT) in adults and may be efficacious for improving diminished cardiac function in obese children. The aim of this study was to compare the effects of HIIT, MICT and nutrition advice interventions on resting left ventricular (LV) peak systolic tissue velocity (S') in obese children.Ninety-nine obese children were randomised into one of three 12-week interventions, 1) HIIT [n = 33, 4 × 4 min bouts at 85-95% maximum heart rate (HR), 3 times/week] and nutrition advice, 2) MICT [n = 32, 44 min at 60-70% HR, 3 times/week] and nutrition advice, and 3) nutrition advice only (nutrition) [n = 34].Twelve weeks of HIIT and MICT were equally efficacious, but superior to nutrition, for normalising resting LV S' in children with obesity (estimated mean difference 1.0 cm/s, 95% confidence interval 0.5 to 1.6 cm/s, P

Physicochemical and biological characterization of chitosan-microRNA nanocomplexes for gene delivery to MCF-7 breast cancer cells

Cancer gene therapy requires the design of non-viral vectors that carry genetic material and selectively deliver it with minimal toxicity. Non-viral vectors based on cationic natural polymers can form electrostatic complexes with negatively-charged polynucleotides such as microRNAs (miRNAs). Here we investigated the physicochemical/biophysical properties of chitosan–hsa-miRNA-145 (CS–miRNA) nanocomplexes and the biological responses of MCF-7 breast cancer cells cultured in vitro. Self-assembled CS–miRNA nanocomplexes were produced with a range of (+/−) charge ratios (from 0.6 to 8) using chitosans with various degrees of acetylation and molecular weight. The Z-average particle diameter of the complexes was <200 nm. The surface charge increased with increasing amount of chitosan. We observed that chitosan induces the base-stacking of miRNA in a concentration dependent manner. Surface plasmon resonance spectroscopy shows that complexes formed by low degree of acetylation chitosans are highly stable, regardless of the molecular weight. We found no evidence that these complexes were cytotoxic towards MCF-7 cells. Furthermore, CS–miRNA nanocomplexes with degree of acetylation 12% and 29% were biologically active, showing successful downregulation of target mRNA expression in MCF-7 cells. Our data, therefore, shows that CS–miRNA complexes offer a promising non-viral platform for breast cancer gene therapy